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序列比对程式,主要一开始输入两串DNA序列,然后设置MATCH的值,最后算出分数-sequence alignment program, began to import store a DNA sequence, then set up MATCH value, calculate the final score
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clustalw1.83.DOS.ZIP,用于多序列比对的软件,运行在DOS平台下-clustalw1.83.DOS.ZIP for multiple sequence alignment software run on the DOS platform
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clustalw1.83.XP,用于多序列比对的软件,运行在Windows平台下-clustalw1.83.XP for multiple sequence alignment software run on the Windows platform
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本程序是针对多序列比对问题,提出用模拟退火算法来处理。比较好地实现了比对算法,能够得到较好的结果-proceedings against the multiple sequence alignment, proposed using simulated annealing algorithm to handle. Better than the realization of the algorithm to achieve better results
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This the implementation of structural SVM for training complex alignment models for protein sequence alignment, especially for homology modeling. The structural SVM algorithm can incorporate many relevant features like secondary structure, relative e
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Pairwise Sequence alignment Algorithm Simulation.
Read 2 input strings and then calculate the Pairwise Sequence alignment.
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The task of clustering Web sessions is to group Web sessions based on similarity and consists of maximizing the intra-
group similarity while minimizing the inter-group similarity.
The first and foremost question needed to be considered in cluste
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CAUSA: 基于密码子-氨基酸联合序列比对构建高精确度分子进化树 生物信息学、基因组学(包括功能基因组学和比较基因组学)的主要目的是研究生物基因、蛋白和基因组的结构和功能,并重构生物基因、蛋白和基因组的进化历史。多序列比对(multiple sequence alignment, MSA)是DNA和蛋白质分子进化分析、以及结构与功能研究的基本工具。目前多序列比对已经有很多方法,如clustalw, MUSCLE, MAFFT, T-Coffee, PRANK,等等,但序列比对依然容易产生系统性
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SVMstruct is a Support Vector Machine (SVM) algorithm for predicting multivariate or structured outputs. It performs supervised learning by approximating a mapping
h: X --> Y
using labeled training examples (x1,y1), ..., (xn,yn). Unlike regula
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经典生物信息学多序列比对工具clustalw,采用Feng-Dolittle渐进比对算法,Classic bioinformatics tools for multiple sequence alignment clustalw, using Feng-Dolittle progressive alignment algorithm
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一种有用的序列分析软件,可实现序列比对分析,效果很不错!,A useful sequence analysis software, can be realized sequence alignment analysis, the effect is very good!
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这也是一款很好的多序列比对软件,在生物信息学的应用中很广泛-This is a very good multiple sequence alignment software, the application of bioinformatics is extensively
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unix,linux下编译。用于蛋白质,DNA序列比对,支持双序列或多序列比对。
-unix, linux under the compiler. For protein, DNA sequence alignment to support the dual-sequence or multiple sequence alignment right.
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Multiple Sequence Alignment Using Maximum Spanning Tree
生物信息学中一个重要topic:多序列联配。这里用最大生成树的思想来进行联配,算法为C语言实现。本程序在Dev-C++,Win Vista环境下实现。-Multiple Sequence Alignment Using Maximum Spanning Tree Bioinformatics an important topic: Multiple Sequence Alignme
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Sequence alignment that could make between two genome
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Sequence Alignment of DNA
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这是一个基于HMM 模型的生物多序列比对算法的linux实现版本。hmmer-This is a biological model based on HMM multiple sequence alignment algorithm to achieve the linux version. hmmer
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Periodic Motion Detection and Segmentation via
Approximate Sequence Alignment
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生物学序列比对软件,与blast相比能容许gap的存在,寻找SV的利器!-Biological sequence alignment software, compared with the blast to allow the existence of gap to find the SV tool!
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Implementation of simple local alignment algorithm . Implementation the classical affine-gap local alignment algorithm, for sequence over the 20-letter protein alphabet. The Blosum scoring matrix can be found in attachment. For the data attached the
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